Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RPS4XP62701 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RPS4XP62701 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RPS4XP62701 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.15■□□□□ 0.02
RPS4XP62701 AL391005.1-201ENST00000623953 2435 ntBASIC15.15■□□□□ 0.02
RPS4XP62701 AC006504.4-201ENST00000592118 1568 ntBASIC15.15■□□□□ 0.02
RPS4XP62701 MTHFR-217ENST00000641820 1569 ntBASIC15.15■□□□□ 0.02
RPS4XP62701 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4XP62701 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.14■□□□□ 0.01
RPS4XP62701 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.14■□□□□ 0.01
RPS4XP62701 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RPS4XP62701 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 AL662844.4-201ENST00000606367 2838 ntBASIC15.14■□□□□ 0.01
RPS4XP62701 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.14■□□□□ 0.01
RPS4XP62701 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.14■□□□□ 0.01
RPS4XP62701 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.14■□□□□ 0.01
RPS4XP62701 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 GGT3P-204ENST00000453783 1664 ntBASIC15.14■□□□□ 0.01
RPS4XP62701 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.14■□□□□ 0.01
RPS4XP62701 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 KRT18P27-201ENST00000427733 1299 ntBASIC15.14■□□□□ 0.01
RPS4XP62701 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.14■□□□□ 0.01
RPS4XP62701 RNA5SP415-201ENST00000517246 115 ntBASIC15.14■□□□□ 0.01
RPS4XP62701 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
RPS4XP62701 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
RPS4XP62701 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RPS4XP62701 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RPS4XP62701 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RPS4XP62701 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4XP62701 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.13■□□□□ 0.01
RPS4XP62701 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.13■□□□□ 0.01
RPS4XP62701 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.13■□□□□ 0.01
RPS4XP62701 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
RPS4XP62701 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.13■□□□□ 0.01
RPS4XP62701 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.13■□□□□ 0.01
RPS4XP62701 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.13■□□□□ 0.01
RPS4XP62701 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.13■□□□□ 0.01
RPS4XP62701 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 SLC25A6P2-201ENST00000497974 877 ntBASIC15.13■□□□□ 0.01
RPS4XP62701 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.13■□□□□ 0.01
RPS4XP62701 AC012640.2-201ENST00000561606 901 ntBASIC15.13■□□□□ 0.01
RPS4XP62701 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 AL356488.2-201ENST00000602755 427 ntBASIC15.13■□□□□ 0.01
RPS4XP62701 PI4KAP1-204ENST00000612579 1703 ntBASIC15.13■□□□□ 0.01
RPS4XP62701 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.13■□□□□ 0.01
RPS4XP62701 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.13■□□□□ 0.01
RPS4XP62701 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
RPS4XP62701 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.13■□□□□ 0.01
RPS4XP62701 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RPS4XP62701 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4XP62701 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.12■□□□□ 0.01
RPS4XP62701 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RPS4XP62701 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 AL512652.2-201ENST00000625156 1716 ntBASIC15.12■□□□□ 0.01
RPS4XP62701 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms