Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 AC092902.6-201ENST00000641783 218 ntBASIC19.18■□□□□ 0.66
CHMP4BP1P59074 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP4BP1P59074 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.17■□□□□ 0.66
CHMP4BP1P59074 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 PCDH8P1-201ENST00000428983 2773 ntBASIC19.17■□□□□ 0.66
CHMP4BP1P59074 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHMP4BP1P59074 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHMP4BP1P59074 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms