Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.32■■□□□ 1
BRPF1P55201 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.32■■□□□ 1
BRPF1P55201 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.32■■□□□ 1
BRPF1P55201 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.32■■□□□ 1
BRPF1P55201 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BRPF1P55201 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.32■■□□□ 1
BRPF1P55201 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.31■■□□□ 1
BRPF1P55201 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 GPAA1P2-202ENST00000606848 1787 ntBASIC21.31■■□□□ 1
BRPF1P55201 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.31■■□□□ 1
BRPF1P55201 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
BRPF1P55201 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 AC092474.2-201ENST00000424288 719 ntBASIC21.31■■□□□ 1
BRPF1P55201 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
BRPF1P55201 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.31■■□□□ 1
BRPF1P55201 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
BRPF1P55201 AP002472.1-201ENST00000577490 586 ntBASIC21.31■■□□□ 1
BRPF1P55201 AL031055.1-201ENST00000606362 631 ntBASIC21.31■■□□□ 1
BRPF1P55201 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.31■■□□□ 1
BRPF1P55201 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.31■■□□□ 1
BRPF1P55201 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.31■■□□□ 1
BRPF1P55201 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
BRPF1P55201 AC084018.2-201ENST00000613093 2607 ntBASIC21.3■■□□□ 1
BRPF1P55201 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
BRPF1P55201 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.3■■□□□ 1
BRPF1P55201 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
BRPF1P55201 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BRPF1P55201 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
BRPF1P55201 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.3■■□□□ 1
BRPF1P55201 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.3■■□□□ 1
BRPF1P55201 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.3■■□□□ 1
BRPF1P55201 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.3■■□□□ 1
BRPF1P55201 AL009183.1-201ENST00000603760 355 ntBASIC21.3■■□□□ 1
BRPF1P55201 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.3■■□□□ 1
BRPF1P55201 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
BRPF1P55201 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.3■■□□□ 1
BRPF1P55201 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.3■■□□□ 1
BRPF1P55201 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.3■■□□□ 1
BRPF1P55201 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.3■■□□□ 1
BRPF1P55201 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
BRPF1P55201 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BRPF1P55201 BCAR1-209ENST00000546196 1340 ntBASIC21.29■■□□□ 1
BRPF1P55201 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.29■■□□□ 1
BRPF1P55201 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.29■■□□□ 1
BRPF1P55201 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 UBALD1-205ENST00000590891 2641 ntBASIC21.29■■□□□ 1
BRPF1P55201 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
BRPF1P55201 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
BRPF1P55201 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.29■■□□□ 1
BRPF1P55201 AC021097.1-201ENST00000607902 574 ntBASIC21.29■■□□□ 1
BRPF1P55201 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.29■■□□□ 1
BRPF1P55201 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 AC092865.6-201ENST00000642101 219 ntBASIC21.29■■□□□ 1
BRPF1P55201 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.29■■□□□ 1
BRPF1P55201 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.29■■□□□ 1
BRPF1P55201 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.29■■□□□ 1
BRPF1P55201 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
BRPF1P55201 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
BRPF1P55201 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.28■■□□□ 1
BRPF1P55201 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.28■■□□□ 1
BRPF1P55201 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.28■■□□□ 1
BRPF1P55201 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.28■■□□□ 1
BRPF1P55201 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.28■■□□□ 1
BRPF1P55201 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRPF1P55201 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
BRPF1P55201 MIR4469-201ENST00000583919 79 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms