Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.45■□□□□ 0.54
PMS1P54277 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PMS1P54277 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.44■□□□□ 0.54
PMS1P54277 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.44■□□□□ 0.54
PMS1P54277 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.44■□□□□ 0.54
PMS1P54277 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.44■□□□□ 0.54
PMS1P54277 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 RN7SL510P-201ENST00000581311 263 ntBASIC18.44■□□□□ 0.54
PMS1P54277 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.44■□□□□ 0.54
PMS1P54277 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PMS1P54277 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PMS1P54277 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PMS1P54277 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.44■□□□□ 0.54
PMS1P54277 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.44■□□□□ 0.54
PMS1P54277 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PMS1P54277 AL513523.2-202ENST00000427283 2040 ntBASIC18.44■□□□□ 0.54
PMS1P54277 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 KRT18P67-201ENST00000432816 1264 ntBASIC18.43■□□□□ 0.54
PMS1P54277 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.43■□□□□ 0.54
PMS1P54277 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.43■□□□□ 0.54
PMS1P54277 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.43■□□□□ 0.54
PMS1P54277 AC105339.3-201ENST00000560043 636 ntBASIC18.43■□□□□ 0.54
PMS1P54277 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.43■□□□□ 0.54
PMS1P54277 AL031008.1-201ENST00000619963 541 ntBASIC18.43■□□□□ 0.54
PMS1P54277 FAM215A-202ENST00000632077 792 ntBASIC18.43■□□□□ 0.54
PMS1P54277 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PMS1P54277 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
PMS1P54277 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.43■□□□□ 0.54
PMS1P54277 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMS1P54277 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 AL353732.1-201ENST00000569618 1459 ntBASIC18.42■□□□□ 0.54
PMS1P54277 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.42■□□□□ 0.54
PMS1P54277 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.42■□□□□ 0.54
PMS1P54277 AC104692.2-201ENST00000603054 253 ntBASIC18.42■□□□□ 0.54
PMS1P54277 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.42■□□□□ 0.54
PMS1P54277 AC132872.4-202ENST00000622924 2756 ntBASIC18.42■□□□□ 0.54
PMS1P54277 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PMS1P54277 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PMS1P54277 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.42■□□□□ 0.54
PMS1P54277 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms