Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX2-5P52952 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NKX2-5P52952 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX2-5P52952 AC027612.3-201ENST00000413684 1047 ntBASIC14.28□□□□□ -0.12
NKX2-5P52952 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 CDC14C-201ENST00000428251 1719 ntBASIC14.28□□□□□ -0.12
NKX2-5P52952 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 SUDS3P1-201ENST00000505831 966 ntBASIC14.28□□□□□ -0.12
NKX2-5P52952 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.28□□□□□ -0.12
NKX2-5P52952 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NKX2-5P52952 AC142381.2-201ENST00000566120 298 ntBASIC14.28□□□□□ -0.12
NKX2-5P52952 AC069236.1-201ENST00000604339 616 ntBASIC14.28□□□□□ -0.12
NKX2-5P52952 AC008622.2-201ENST00000617006 1229 ntBASIC14.28□□□□□ -0.12
NKX2-5P52952 AC097376.2-205ENST00000610159 5334 ntBASIC14.28□□□□□ -0.12
NKX2-5P52952 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-5P52952 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NKX2-5P52952 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-5P52952 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-5P52952 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX2-5P52952 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-5P52952 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NKX2-5P52952 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-5P52952 GGT4P-201ENST00000623672 1708 ntBASIC14.27□□□□□ -0.12
NKX2-5P52952 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-5P52952 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-5P52952 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NKX2-5P52952 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.27□□□□□ -0.12
NKX2-5P52952 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-5P52952 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX2-5P52952 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-5P52952 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 AC026396.1-201ENST00000419388 421 ntBASIC14.27□□□□□ -0.13
NKX2-5P52952 AC005104.2-201ENST00000427818 678 ntBASIC14.27□□□□□ -0.13
NKX2-5P52952 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX2-5P52952 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.27□□□□□ -0.13
NKX2-5P52952 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NKX2-5P52952 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX2-5P52952 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX2-5P52952 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX2-5P52952 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX2-5P52952 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX2-5P52952 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX2-5P52952 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX2-5P52952 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-5P52952 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-5P52952 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-5P52952 AC006449.6-201ENST00000612330 2296 ntBASIC14.26□□□□□ -0.13
NKX2-5P52952 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-5P52952 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms