Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SMSP52788 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.77■□□□□ 0.12
SMSP52788 HMGN1P19-201ENST00000436976 333 ntBASIC15.77■□□□□ 0.12
SMSP52788 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMSP52788 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.77■□□□□ 0.12
SMSP52788 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.77■□□□□ 0.12
SMSP52788 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
SMSP52788 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.77■□□□□ 0.12
SMSP52788 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SMSP52788 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SMSP52788 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SMSP52788 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SMSP52788 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.77■□□□□ 0.11
SMSP52788 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMSP52788 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.76■□□□□ 0.11
SMSP52788 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SMSP52788 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.76■□□□□ 0.11
SMSP52788 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.76■□□□□ 0.11
SMSP52788 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SMSP52788 AC211486.1-202ENST00000416371 468 ntBASIC15.76■□□□□ 0.11
SMSP52788 AC009947.1-201ENST00000444350 727 ntBASIC15.76■□□□□ 0.11
SMSP52788 AC211476.1-201ENST00000503899 468 ntBASIC15.76■□□□□ 0.11
SMSP52788 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 AC027796.2-201ENST00000575326 344 ntBASIC15.76■□□□□ 0.11
SMSP52788 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.76■□□□□ 0.11
SMSP52788 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.76■□□□□ 0.11
SMSP52788 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
SMSP52788 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.76■□□□□ 0.11
SMSP52788 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMSP52788 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SMSP52788 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMSP52788 AC079776.2-201ENST00000641154 1609 ntBASIC15.76■□□□□ 0.11
SMSP52788 PCDH8P1-201ENST00000428983 2773 ntBASIC15.75■□□□□ 0.11
SMSP52788 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.75■□□□□ 0.11
SMSP52788 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.75■□□□□ 0.11
SMSP52788 AC078925.2-201ENST00000624013 1973 ntBASIC15.75■□□□□ 0.11
SMSP52788 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.75■□□□□ 0.11
SMSP52788 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.75■□□□□ 0.11
SMSP52788 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.75■□□□□ 0.11
SMSP52788 BX005266.1-201ENST00000473402 457 ntBASIC15.75■□□□□ 0.11
SMSP52788 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.75■□□□□ 0.11
SMSP52788 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.75■□□□□ 0.11
SMSP52788 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SMSP52788 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms