Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB28P51157 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB28P51157 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB28P51157 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB28P51157 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.16■□□□□ 0.18
RAB28P51157 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB28P51157 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB28P51157 AC092474.2-201ENST00000424288 719 ntBASIC16.16■□□□□ 0.18
RAB28P51157 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 AC092902.6-201ENST00000641783 218 ntBASIC16.16■□□□□ 0.18
RAB28P51157 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB28P51157 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RAB28P51157 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB28P51157 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB28P51157 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB28P51157 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB28P51157 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB28P51157 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 MIR1233-2-201ENST00000408138 82 ntBASIC16.15■□□□□ 0.18
RAB28P51157 MIR1233-1-201ENST00000408722 82 ntBASIC16.15■□□□□ 0.18
RAB28P51157 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 AC112482.1-201ENST00000492080 688 ntBASIC16.15■□□□□ 0.18
RAB28P51157 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.15■□□□□ 0.18
RAB28P51157 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB28P51157 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB28P51157 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
RAB28P51157 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB28P51157 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB28P51157 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB28P51157 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB28P51157 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RAB28P51157 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB28P51157 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB28P51157 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAB28P51157 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB28P51157 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB28P51157 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB28P51157 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB28P51157 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB28P51157 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms