Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CENPFP49454 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPFP49454 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CENPFP49454 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CENPFP49454 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.62■□□□□ 0.57
CENPFP49454 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.62■□□□□ 0.57
CENPFP49454 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.62■□□□□ 0.57
CENPFP49454 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 AL589987.1-201ENST00000453380 819 ntBASIC18.62■□□□□ 0.57
CENPFP49454 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 AC123567.1-201ENST00000548294 1261 ntBASIC18.62■□□□□ 0.57
CENPFP49454 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.62■□□□□ 0.57
CENPFP49454 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.62■□□□□ 0.57
CENPFP49454 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CENPFP49454 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
CENPFP49454 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPFP49454 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPFP49454 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 AC114501.2-201ENST00000439631 535 ntBASIC18.61■□□□□ 0.57
CENPFP49454 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.61■□□□□ 0.57
CENPFP49454 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.61■□□□□ 0.57
CENPFP49454 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CENPFP49454 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.61■□□□□ 0.57
CENPFP49454 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.61■□□□□ 0.57
CENPFP49454 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.61■□□□□ 0.57
CENPFP49454 CTBP2P5-201ENST00000454986 1264 ntBASIC18.61■□□□□ 0.57
CENPFP49454 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.61■□□□□ 0.57
CENPFP49454 AC133552.6-201ENST00000613406 534 ntBASIC18.61■□□□□ 0.57
CENPFP49454 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.61■□□□□ 0.57
CENPFP49454 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.61■□□□□ 0.57
CENPFP49454 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.61■□□□□ 0.57
CENPFP49454 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CENPFP49454 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 MSTO2P-201ENST00000314835 1709 ntBASIC18.61■□□□□ 0.57
CENPFP49454 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.61■□□□□ 0.57
CENPFP49454 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CENPFP49454 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPFP49454 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPFP49454 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPFP49454 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPFP49454 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPFP49454 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CENPFP49454 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CENPFP49454 AC139713.2-201ENST00000641328 2723 ntBASIC18.6■□□□□ 0.57
CENPFP49454 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPFP49454 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.6■□□□□ 0.57
CENPFP49454 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPFP49454 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPFP49454 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPFP49454 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms