Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CENPAP49450 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CENPAP49450 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CENPAP49450 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CENPAP49450 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.28■□□□□ 0.04
CENPAP49450 POM121L3P-201ENST00000419331 1163 ntBASIC15.28■□□□□ 0.04
CENPAP49450 AL020989.1-201ENST00000422979 469 ntBASIC15.28■□□□□ 0.04
CENPAP49450 IGHV3-47-201ENST00000425060 335 ntBASIC15.28■□□□□ 0.04
CENPAP49450 ACTG1P4-201ENST00000425123 1122 ntBASIC15.28■□□□□ 0.04
CENPAP49450 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CENPAP49450 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CENPAP49450 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CENPAP49450 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.28■□□□□ 0.04
CENPAP49450 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.28■□□□□ 0.04
CENPAP49450 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.28■□□□□ 0.04
CENPAP49450 AC138894.3-201ENST00000603787 634 ntBASIC15.28■□□□□ 0.04
CENPAP49450 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 AC091076.1-201ENST00000610741 619 ntBASIC15.28■□□□□ 0.04
CENPAP49450 AC114341.1-201ENST00000618070 349 ntBASIC15.28■□□□□ 0.04
CENPAP49450 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CENPAP49450 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CENPAP49450 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
CENPAP49450 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.28■□□□□ 0.04
CENPAP49450 AC103702.1-201ENST00000548801 2630 ntBASIC15.28■□□□□ 0.04
CENPAP49450 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPAP49450 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CENPAP49450 FRMD8P1-201ENST00000440433 1524 ntBASIC15.27■□□□□ 0.04
CENPAP49450 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CENPAP49450 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CENPAP49450 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPAP49450 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.27■□□□□ 0.04
CENPAP49450 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.27■□□□□ 0.04
CENPAP49450 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CENPAP49450 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPAP49450 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPAP49450 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.27■□□□□ 0.04
CENPAP49450 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPAP49450 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPAP49450 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.27■□□□□ 0.04
CENPAP49450 AC012615.1-201ENST00000565797 1299 ntBASIC15.27■□□□□ 0.04
CENPAP49450 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPAP49450 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CENPAP49450 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CENPAP49450 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CENPAP49450 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CENPAP49450 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CENPAP49450 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CENPAP49450 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.27■□□□□ 0.03
CENPAP49450 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.27■□□□□ 0.03
CENPAP49450 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.27■□□□□ 0.03
CENPAP49450 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CENPAP49450 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CENPAP49450 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.27■□□□□ 0.03
CENPAP49450 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.27■□□□□ 0.03
CENPAP49450 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CENPAP49450 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CENPAP49450 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.26■□□□□ 0.03
CENPAP49450 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CENPAP49450 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.26■□□□□ 0.03
CENPAP49450 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CENPAP49450 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CENPAP49450 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CENPAP49450 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CENPAP49450 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPAP49450 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms