Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A12P48065 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A12P48065 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A12P48065 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A12P48065 MTHFR-217ENST00000641820 1569 ntBASIC16.14■□□□□ 0.17
SLC6A12P48065 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SLC6A12P48065 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A12P48065 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A12P48065 AL513480.1-201ENST00000451731 511 ntBASIC16.14■□□□□ 0.17
SLC6A12P48065 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A12P48065 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A12P48065 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A12P48065 AL031432.2-201ENST00000566714 459 ntBASIC16.14■□□□□ 0.17
SLC6A12P48065 AL928711.1-201ENST00000570165 459 ntBASIC16.14■□□□□ 0.17
SLC6A12P48065 MIR3909-201ENST00000579518 119 ntBASIC16.14■□□□□ 0.17
SLC6A12P48065 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A12P48065 DOC2GP-204ENST00000639052 2548 ntBASIC16.14■□□□□ 0.17
SLC6A12P48065 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A12P48065 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A12P48065 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A12P48065 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC6A12P48065 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
SLC6A12P48065 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SLC6A12P48065 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 AC104109.2-201ENST00000602919 1418 ntBASIC16.13■□□□□ 0.17
SLC6A12P48065 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC6A12P48065 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SLC6A12P48065 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC6A12P48065 PCGF3-213ENST00000620529 1899 ntBASIC16.13■□□□□ 0.17
SLC6A12P48065 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC6A12P48065 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC6A12P48065 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC6A12P48065 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC6A12P48065 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A12P48065 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 LINC01144-201ENST00000626198 1710 ntBASIC16.12■□□□□ 0.17
SLC6A12P48065 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC6A12P48065 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC6A12P48065 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC6A12P48065 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC6A12P48065 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms