Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.49■□□□□ 0.39
MTHFRP42898 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
MTHFRP42898 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 AC142381.1-201ENST00000426099 345 ntBASIC17.49■□□□□ 0.39
MTHFRP42898 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.49■□□□□ 0.39
MTHFRP42898 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.49■□□□□ 0.39
MTHFRP42898 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.49■□□□□ 0.39
MTHFRP42898 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.49■□□□□ 0.39
MTHFRP42898 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
MTHFRP42898 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
MTHFRP42898 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 AC021097.1-201ENST00000607902 574 ntBASIC17.48■□□□□ 0.39
MTHFRP42898 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MTHFRP42898 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MTHFRP42898 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.48■□□□□ 0.39
MTHFRP42898 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MTHFRP42898 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.47■□□□□ 0.39
MTHFRP42898 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MTHFRP42898 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MTHFRP42898 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MTHFRP42898 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.47■□□□□ 0.39
MTHFRP42898 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.47■□□□□ 0.39
MTHFRP42898 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.47■□□□□ 0.39
MTHFRP42898 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MTHFRP42898 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.47■□□□□ 0.39
MTHFRP42898 KRT18P34-201ENST00000488218 1270 ntBASIC17.47■□□□□ 0.39
MTHFRP42898 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.47■□□□□ 0.39
MTHFRP42898 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MTHFRP42898 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.47■□□□□ 0.39
MTHFRP42898 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.47■□□□□ 0.39
MTHFRP42898 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms