Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL135744.1-201ENST00000565098 629 ntBASIC15.92■□□□□ 0.14
RORAP35398 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.92■□□□□ 0.14
RORAP35398 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.92■□□□□ 0.14
RORAP35398 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.92■□□□□ 0.14
RORAP35398 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.92■□□□□ 0.14
RORAP35398 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.91■□□□□ 0.14
RORAP35398 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RORAP35398 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.91■□□□□ 0.14
RORAP35398 AC092474.2-201ENST00000424288 719 ntBASIC15.91■□□□□ 0.14
RORAP35398 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 AC079140.1-201ENST00000508039 487 ntBASIC15.91■□□□□ 0.14
RORAP35398 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.91■□□□□ 0.14
RORAP35398 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 MPDU1-223ENST00000582151 728 ntBASIC15.91■□□□□ 0.14
RORAP35398 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.91■□□□□ 0.14
RORAP35398 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 AC009093.7-201ENST00000623853 1223 ntBASIC15.91■□□□□ 0.14
RORAP35398 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RORAP35398 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.91■□□□□ 0.14
RORAP35398 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
RORAP35398 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RORAP35398 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RORAP35398 CROCCP1-201ENST00000426910 5675 ntBASIC15.9■□□□□ 0.14
RORAP35398 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RORAP35398 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.9■□□□□ 0.14
RORAP35398 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RORAP35398 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.9■□□□□ 0.14
RORAP35398 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RORAP35398 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RORAP35398 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 RNU1-129P-201ENST00000384064 167 ntBASIC15.9■□□□□ 0.14
RORAP35398 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.9■□□□□ 0.14
RORAP35398 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.9■□□□□ 0.14
RORAP35398 AC109322.1-201ENST00000524499 1264 ntBASIC15.9■□□□□ 0.14
RORAP35398 AC087641.1-201ENST00000557561 1021 ntBASIC15.9■□□□□ 0.14
RORAP35398 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.9■□□□□ 0.14
RORAP35398 MIR3909-201ENST00000579518 119 ntBASIC15.9■□□□□ 0.14
RORAP35398 U1.21-201ENST00000580816 167 ntBASIC15.9■□□□□ 0.14
RORAP35398 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.9■□□□□ 0.14
RORAP35398 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.9■□□□□ 0.14
RORAP35398 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 KRT8P49-201ENST00000604166 1432 ntBASIC15.9■□□□□ 0.14
RORAP35398 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RORAP35398 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.9■□□□□ 0.14
RORAP35398 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RORAP35398 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RORAP35398 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.9■□□□□ 0.14
RORAP35398 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.9■□□□□ 0.14
RORAP35398 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RORAP35398 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RORAP35398 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RORAP35398 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RORAP35398 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.89■□□□□ 0.13
RORAP35398 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RORAP35398 AL021920.2-201ENST00000624828 1351 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms