Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.42■□□□□ 0.06
SHC1P29353 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SHC1P29353 FRMD8P1-201ENST00000440433 1524 ntBASIC15.42■□□□□ 0.06
SHC1P29353 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHC1P29353 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SHC1P29353 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHC1P29353 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHC1P29353 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHC1P29353 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHC1P29353 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHC1P29353 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SHC1P29353 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.42■□□□□ 0.06
SHC1P29353 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHC1P29353 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.41■□□□□ 0.06
SHC1P29353 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.41■□□□□ 0.06
SHC1P29353 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC1P29353 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC1P29353 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
SHC1P29353 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 AP000347.1-202ENST00000435868 847 ntBASIC15.41■□□□□ 0.06
SHC1P29353 AC108073.2-201ENST00000464002 357 ntBASIC15.41■□□□□ 0.06
SHC1P29353 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.41■□□□□ 0.06
SHC1P29353 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC1P29353 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.41■□□□□ 0.06
SHC1P29353 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.41■□□□□ 0.06
SHC1P29353 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.41■□□□□ 0.06
SHC1P29353 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SHC1P29353 TERC-201ENST00000602385 541 ntBASIC15.41■□□□□ 0.06
SHC1P29353 AC008667.4-201ENST00000607370 168 ntBASIC15.41■□□□□ 0.06
SHC1P29353 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.41■□□□□ 0.06
SHC1P29353 BX640515.1-201ENST00000617215 977 ntBASIC15.41■□□□□ 0.06
SHC1P29353 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.41■□□□□ 0.06
SHC1P29353 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC1P29353 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SHC1P29353 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC1P29353 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.4■□□□□ 0.06
SHC1P29353 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC1P29353 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.4■□□□□ 0.06
SHC1P29353 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC1P29353 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.4■□□□□ 0.06
SHC1P29353 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.4■□□□□ 0.06
SHC1P29353 AC026691.1-201ENST00000602502 2017 ntBASIC15.4■□□□□ 0.06
SHC1P29353 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC1P29353 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SHC1P29353 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.4■□□□□ 0.06
SHC1P29353 AC009947.1-201ENST00000444350 727 ntBASIC15.4■□□□□ 0.06
SHC1P29353 PAWRP1-201ENST00000451083 565 ntBASIC15.4■□□□□ 0.06
SHC1P29353 IGHV3-65-201ENST00000523210 341 ntBASIC15.4■□□□□ 0.06
SHC1P29353 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.4■□□□□ 0.06
SHC1P29353 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC1P29353 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.4■□□□□ 0.06
SHC1P29353 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 AC104109.2-201ENST00000602919 1418 ntBASIC15.4■□□□□ 0.06
SHC1P29353 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SHC1P29353 PCDHB17P-201ENST00000539533 2393 ntBASIC15.4■□□□□ 0.06
SHC1P29353 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
SHC1P29353 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SHC1P29353 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC1P29353 AL391005.1-201ENST00000623953 2435 ntBASIC15.39■□□□□ 0.05
SHC1P29353 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHC1P29353 AC092068.3-201ENST00000587894 2016 ntBASIC15.39■□□□□ 0.05
SHC1P29353 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
SHC1P29353 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SHC1P29353 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHC1P29353 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHC1P29353 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHC1P29353 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHC1P29353 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHC1P29353 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.39■□□□□ 0.05
SHC1P29353 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.39■□□□□ 0.05
SHC1P29353 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms