Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
APEX1P27695 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
APEX1P27695 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
APEX1P27695 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
APEX1P27695 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
APEX1P27695 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 AC132938.5-201ENST00000624980 1813 ntBASIC15.22■□□□□ 0.03
APEX1P27695 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APEX1P27695 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
APEX1P27695 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
APEX1P27695 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
APEX1P27695 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
APEX1P27695 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.21■□□□□ 0.03
APEX1P27695 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.21■□□□□ 0.03
APEX1P27695 PMPCAP1-201ENST00000508114 1576 ntBASIC15.21■□□□□ 0.03
APEX1P27695 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
APEX1P27695 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.21■□□□□ 0.03
APEX1P27695 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.21■□□□□ 0.03
APEX1P27695 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.21■□□□□ 0.03
APEX1P27695 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.21■□□□□ 0.03
APEX1P27695 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.21■□□□□ 0.03
APEX1P27695 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.21■□□□□ 0.03
APEX1P27695 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.21■□□□□ 0.03
APEX1P27695 STK19B-204ENST00000512515 211 ntBASIC15.21■□□□□ 0.03
APEX1P27695 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.21■□□□□ 0.03
APEX1P27695 AP001269.4-201ENST00000609611 512 ntBASIC15.21■□□□□ 0.03
APEX1P27695 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
APEX1P27695 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.21■□□□□ 0.03
APEX1P27695 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.21■□□□□ 0.03
APEX1P27695 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.21■□□□□ 0.03
APEX1P27695 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
APEX1P27695 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
APEX1P27695 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
APEX1P27695 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
APEX1P27695 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.21■□□□□ 0.02
APEX1P27695 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
APEX1P27695 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APEX1P27695 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
APEX1P27695 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
APEX1P27695 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
APEX1P27695 AC093525.9-201ENST00000624961 1746 ntBASIC15.2■□□□□ 0.02
APEX1P27695 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
APEX1P27695 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.2■□□□□ 0.02
APEX1P27695 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms