Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.43□□□□□ -0.1
CCL1P22362 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.43□□□□□ -0.1
CCL1P22362 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.43□□□□□ -0.1
CCL1P22362 AC008667.4-201ENST00000607370 168 ntBASIC14.43□□□□□ -0.1
CCL1P22362 AC010654.1-201ENST00000615722 808 ntBASIC14.43□□□□□ -0.1
CCL1P22362 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL1P22362 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL1P22362 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL1P22362 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL1P22362 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL1P22362 AC136632.2-201ENST00000512891 861 ntBASIC14.42□□□□□ -0.1
CCL1P22362 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.42□□□□□ -0.1
CCL1P22362 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.42□□□□□ -0.1
CCL1P22362 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL1P22362 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.42□□□□□ -0.1
CCL1P22362 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
CCL1P22362 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 AC046158.3-201ENST00000624947 2558 ntBASIC14.42□□□□□ -0.1
CCL1P22362 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL1P22362 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL1P22362 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCL1P22362 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL1P22362 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CCL1P22362 IGHV3-65-201ENST00000523210 341 ntBASIC14.41□□□□□ -0.1
CCL1P22362 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL1P22362 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL1P22362 OR7E14P-202ENST00000530490 1290 ntBASIC14.41□□□□□ -0.1
CCL1P22362 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL1P22362 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL1P22362 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCL1P22362 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCL1P22362 AC079328.2-201ENST00000561241 3354 ntBASIC14.4□□□□□ -0.1
CCL1P22362 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms