Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN3P20807 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN3P20807 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CAPN3P20807 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 PMPCAP1-201ENST00000508114 1576 ntBASIC16.19■□□□□ 0.18
CAPN3P20807 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 TP73-AS1-210ENST00000637775 1455 ntBASIC16.19■□□□□ 0.18
CAPN3P20807 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN3P20807 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN3P20807 MIR574-201ENST00000385209 96 ntBASIC16.19■□□□□ 0.18
CAPN3P20807 MRPL3P1-201ENST00000400109 1033 ntBASIC16.19■□□□□ 0.18
CAPN3P20807 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN3P20807 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CAPN3P20807 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.19■□□□□ 0.18
CAPN3P20807 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.19■□□□□ 0.18
CAPN3P20807 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.19■□□□□ 0.18
CAPN3P20807 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CAPN3P20807 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
CAPN3P20807 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.19■□□□□ 0.18
CAPN3P20807 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.19■□□□□ 0.18
CAPN3P20807 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN3P20807 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CAPN3P20807 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN3P20807 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN3P20807 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CAPN3P20807 HYMAI-201ENST00000635591 3347 ntBASIC16.19■□□□□ 0.18
CAPN3P20807 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPN3P20807 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN3P20807 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN3P20807 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CAPN3P20807 AP002414.1-201ENST00000391405 1147 ntBASIC16.18■□□□□ 0.18
CAPN3P20807 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN3P20807 MIR1233-2-201ENST00000408138 82 ntBASIC16.18■□□□□ 0.18
CAPN3P20807 MIR1233-1-201ENST00000408722 82 ntBASIC16.18■□□□□ 0.18
CAPN3P20807 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN3P20807 TOB2P1-201ENST00000469761 992 ntBASIC16.18■□□□□ 0.18
CAPN3P20807 AC092183.1-201ENST00000469884 875 ntBASIC16.18■□□□□ 0.18
CAPN3P20807 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN3P20807 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN3P20807 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN3P20807 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN3P20807 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 AF228730.7-201ENST00000641842 219 ntBASIC16.18■□□□□ 0.18
CAPN3P20807 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
CAPN3P20807 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN3P20807 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN3P20807 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN3P20807 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPN3P20807 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CAPN3P20807 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms