Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC3P19447 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.38■□□□□ 0.69
ERCC3P19447 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 MIR943-201ENST00000401286 94 ntBASIC19.38■□□□□ 0.69
ERCC3P19447 PMS2P4-201ENST00000412466 1052 ntBASIC19.38■□□□□ 0.69
ERCC3P19447 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC3P19447 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC3P19447 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC3P19447 KLF2P3-201ENST00000451977 1087 ntBASIC19.38■□□□□ 0.69
ERCC3P19447 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 INGX-202ENST00000489074 768 ntBASIC19.38■□□□□ 0.69
ERCC3P19447 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.38■□□□□ 0.69
ERCC3P19447 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC3P19447 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.38■□□□□ 0.69
ERCC3P19447 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.38■□□□□ 0.69
ERCC3P19447 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
ERCC3P19447 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.38■□□□□ 0.69
ERCC3P19447 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC3P19447 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ERCC3P19447 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ERCC3P19447 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.37■□□□□ 0.69
ERCC3P19447 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ERCC3P19447 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ERCC3P19447 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.37■□□□□ 0.69
ERCC3P19447 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.37■□□□□ 0.69
ERCC3P19447 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.37■□□□□ 0.69
ERCC3P19447 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.37■□□□□ 0.69
ERCC3P19447 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.37■□□□□ 0.69
ERCC3P19447 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.37■□□□□ 0.69
ERCC3P19447 KRT8P23-201ENST00000560090 1207 ntBASIC19.37■□□□□ 0.69
ERCC3P19447 AC026150.2-201ENST00000564693 1156 ntBASIC19.37■□□□□ 0.69
ERCC3P19447 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.37■□□□□ 0.69
ERCC3P19447 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ERCC3P19447 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.37■□□□□ 0.69
ERCC3P19447 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.37■□□□□ 0.69
ERCC3P19447 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.37■□□□□ 0.69
ERCC3P19447 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.37■□□□□ 0.69
ERCC3P19447 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
ERCC3P19447 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC3P19447 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ERCC3P19447 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ERCC3P19447 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.36■□□□□ 0.69
ERCC3P19447 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ERCC3P19447 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ERCC3P19447 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 BASP1P1-201ENST00000430708 665 ntBASIC19.36■□□□□ 0.69
ERCC3P19447 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 SPDYE14P-201ENST00000442619 822 ntBASIC19.36■□□□□ 0.69
ERCC3P19447 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.36■□□□□ 0.69
ERCC3P19447 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.36■□□□□ 0.69
ERCC3P19447 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ERCC3P19447 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.36■□□□□ 0.69
ERCC3P19447 AC084121.4-201ENST00000641598 221 ntBASIC19.36■□□□□ 0.69
ERCC3P19447 AF228730.8-201ENST00000642140 221 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms