Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMPD1P17405 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SMPD1P17405 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SMPD1P17405 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SMPD1P17405 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.49■□□□□ 0.55
SMPD1P17405 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 HLA-J-202ENST00000469281 1241 ntBASIC18.49■□□□□ 0.55
SMPD1P17405 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.49■□□□□ 0.55
SMPD1P17405 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.49■□□□□ 0.55
SMPD1P17405 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.49■□□□□ 0.55
SMPD1P17405 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMPD1P17405 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
SMPD1P17405 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.49■□□□□ 0.55
SMPD1P17405 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.49■□□□□ 0.55
SMPD1P17405 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
SMPD1P17405 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMPD1P17405 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.48■□□□□ 0.55
SMPD1P17405 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SMPD1P17405 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SMPD1P17405 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMPD1P17405 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.48■□□□□ 0.55
SMPD1P17405 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.48■□□□□ 0.55
SMPD1P17405 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.48■□□□□ 0.55
SMPD1P17405 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.48■□□□□ 0.55
SMPD1P17405 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.48■□□□□ 0.55
SMPD1P17405 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.48■□□□□ 0.55
SMPD1P17405 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.48■□□□□ 0.55
SMPD1P17405 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.48■□□□□ 0.55
SMPD1P17405 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.48■□□□□ 0.55
SMPD1P17405 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMPD1P17405 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMPD1P17405 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.48■□□□□ 0.55
SMPD1P17405 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.48■□□□□ 0.55
SMPD1P17405 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SMPD1P17405 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.48■□□□□ 0.55
SMPD1P17405 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SMPD1P17405 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
SMPD1P17405 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMPD1P17405 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMPD1P17405 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMPD1P17405 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.47■□□□□ 0.55
SMPD1P17405 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.47■□□□□ 0.55
SMPD1P17405 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMPD1P17405 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 BCL2-203ENST00000589955 5011 ntBASIC18.47■□□□□ 0.55
SMPD1P17405 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.47■□□□□ 0.55
SMPD1P17405 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SMPD1P17405 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.47■□□□□ 0.55
SMPD1P17405 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.47■□□□□ 0.55
SMPD1P17405 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.47■□□□□ 0.55
SMPD1P17405 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SMPD1P17405 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.47■□□□□ 0.55
SMPD1P17405 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.47■□□□□ 0.55
SMPD1P17405 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.47■□□□□ 0.55
SMPD1P17405 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SMPD1P17405 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.47■□□□□ 0.55
SMPD1P17405 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMPD1P17405 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SMPD1P17405 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.46■□□□□ 0.55
SMPD1P17405 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms