Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CCL4P13236 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCL4P13236 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.72■□□□□ 0.11
CCL4P13236 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.72■□□□□ 0.11
CCL4P13236 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 AL353705.2-201ENST00000428243 662 ntBASIC15.72■□□□□ 0.11
CCL4P13236 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.72■□□□□ 0.11
CCL4P13236 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.72■□□□□ 0.11
CCL4P13236 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.72■□□□□ 0.11
CCL4P13236 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.72■□□□□ 0.11
CCL4P13236 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.72■□□□□ 0.11
CCL4P13236 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.72■□□□□ 0.11
CCL4P13236 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCL4P13236 AC004233.3-201ENST00000607794 1269 ntBASIC15.72■□□□□ 0.11
CCL4P13236 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCL4P13236 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL4P13236 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCL4P13236 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL4P13236 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 PP12613-201ENST00000424958 2230 ntBASIC15.71■□□□□ 0.11
CCL4P13236 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL4P13236 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.71■□□□□ 0.11
CCL4P13236 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 GK-202ENST00000378941 458 ntTSL 3 BASIC15.71■□□□□ 0.11
CCL4P13236 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL4P13236 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.71■□□□□ 0.11
CCL4P13236 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.71■□□□□ 0.11
CCL4P13236 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 SPDYE22P-201ENST00000582158 798 ntBASIC15.71■□□□□ 0.11
CCL4P13236 AC013467.2-201ENST00000605472 835 ntBASIC15.71■□□□□ 0.11
CCL4P13236 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 AC025048.6-201ENST00000634326 1161 ntBASIC15.71■□□□□ 0.11
CCL4P13236 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL4P13236 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL4P13236 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CCL4P13236 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL4P13236 AL035456.1-201ENST00000456064 1369 ntBASIC15.71■□□□□ 0.11
CCL4P13236 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCL4P13236 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL4P13236 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCL4P13236 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCL4P13236 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.7■□□□□ 0.1
CCL4P13236 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 PCDHB17P-201ENST00000539533 2393 ntBASIC15.7■□□□□ 0.1
CCL4P13236 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 SNX33P1-201ENST00000592116 1762 ntBASIC15.7■□□□□ 0.1
CCL4P13236 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 AL133373.2-201ENST00000623187 2828 ntBASIC15.7■□□□□ 0.1
CCL4P13236 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms