Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 AL049757.1-201ENST00000616842 1596 ntBASIC13.72□□□□□ -0.21
DEFA4P12838 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.72□□□□□ -0.21
DEFA4P12838 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
DEFA4P12838 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.72□□□□□ -0.21
DEFA4P12838 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.72□□□□□ -0.21
DEFA4P12838 AC074051.2-201ENST00000565115 352 ntBASIC13.72□□□□□ -0.21
DEFA4P12838 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.72□□□□□ -0.21
DEFA4P12838 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.72□□□□□ -0.21
DEFA4P12838 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.72□□□□□ -0.21
DEFA4P12838 AL358472.4-201ENST00000633140 710 ntBASIC13.72□□□□□ -0.21
DEFA4P12838 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEFA4P12838 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.72□□□□□ -0.21
DEFA4P12838 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.72□□□□□ -0.21
DEFA4P12838 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.71□□□□□ -0.21
DEFA4P12838 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.71□□□□□ -0.21
DEFA4P12838 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
DEFA4P12838 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.71□□□□□ -0.21
DEFA4P12838 LINC02012-201ENST00000608206 1725 ntBASIC13.71□□□□□ -0.21
DEFA4P12838 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.71□□□□□ -0.21
DEFA4P12838 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 SLC25A1P3-201ENST00000395415 828 ntBASIC13.71□□□□□ -0.21
DEFA4P12838 KLF4P1-201ENST00000412782 1185 ntBASIC13.71□□□□□ -0.21
DEFA4P12838 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.71□□□□□ -0.21
DEFA4P12838 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.71□□□□□ -0.21
DEFA4P12838 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.71□□□□□ -0.21
DEFA4P12838 AC011467.2-201ENST00000598425 242 ntBASIC13.71□□□□□ -0.21
DEFA4P12838 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.71□□□□□ -0.21
DEFA4P12838 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.71□□□□□ -0.21
DEFA4P12838 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DEFA4P12838 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DEFA4P12838 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DEFA4P12838 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DEFA4P12838 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
DEFA4P12838 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
DEFA4P12838 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.71□□□□□ -0.22
DEFA4P12838 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DEFA4P12838 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 NSUN5P1-202ENST00000421140 1535 ntBASIC13.7□□□□□ -0.22
DEFA4P12838 NSUN5P2-203ENST00000457352 1529 ntBASIC13.7□□□□□ -0.22
DEFA4P12838 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DEFA4P12838 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DEFA4P12838 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
DEFA4P12838 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms