Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AC006538.1-201ENST00000567905 1585 ntBASIC21.56■■□□□ 1.04
MS4A1P11836 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MS4A1P11836 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.56■■□□□ 1.04
MS4A1P11836 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MS4A1P11836 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
MS4A1P11836 MST1L-201ENST00000442552 2185 ntBASIC21.55■■□□□ 1.04
MS4A1P11836 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
MS4A1P11836 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC21.55■■□□□ 1.04
MS4A1P11836 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
MS4A1P11836 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.55■■□□□ 1.04
MS4A1P11836 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.55■■□□□ 1.04
MS4A1P11836 ELK2BP-201ENST00000415014 1224 ntBASIC21.55■■□□□ 1.04
MS4A1P11836 KRT18P27-201ENST00000427733 1299 ntBASIC21.55■■□□□ 1.04
MS4A1P11836 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.55■■□□□ 1.04
MS4A1P11836 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.55■■□□□ 1.04
MS4A1P11836 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
MS4A1P11836 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
MS4A1P11836 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
MS4A1P11836 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MS4A1P11836 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A1P11836 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC21.54■■□□□ 1.04
MS4A1P11836 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A1P11836 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A1P11836 AC002310.6-201ENST00000624451 1377 ntBASIC21.54■■□□□ 1.04
MS4A1P11836 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A1P11836 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
MS4A1P11836 RNPS1P1-201ENST00000507437 918 ntBASIC21.54■■□□□ 1.04
MS4A1P11836 UNC93B7-201ENST00000509439 705 ntBASIC21.54■■□□□ 1.04
MS4A1P11836 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.54■■□□□ 1.04
MS4A1P11836 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.54■■□□□ 1.04
MS4A1P11836 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.54■■□□□ 1.04
MS4A1P11836 REXO1L3P-201ENST00000622202 1288 ntBASIC21.54■■□□□ 1.04
MS4A1P11836 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MS4A1P11836 PGM5P2-202ENST00000637225 1043 ntBASIC21.54■■□□□ 1.04
MS4A1P11836 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A1P11836 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.54■■□□□ 1.04
MS4A1P11836 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A1P11836 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A1P11836 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.54■■□□□ 1.04
MS4A1P11836 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC21.53■■□□□ 1.04
MS4A1P11836 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MS4A1P11836 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.53■■□□□ 1.04
MS4A1P11836 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC21.53■■□□□ 1.04
MS4A1P11836 AL365203.3-201ENST00000609742 2057 ntBASIC21.53■■□□□ 1.04
MS4A1P11836 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MS4A1P11836 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 AC073621.1-201ENST00000392730 636 ntBASIC21.53■■□□□ 1.04
MS4A1P11836 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.53■■□□□ 1.04
MS4A1P11836 AC136632.2-201ENST00000512891 861 ntBASIC21.53■■□□□ 1.04
MS4A1P11836 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.53■■□□□ 1.04
MS4A1P11836 AC091167.2-201ENST00000579581 588 ntBASIC21.53■■□□□ 1.04
MS4A1P11836 AL121912.1-201ENST00000603683 238 ntBASIC21.53■■□□□ 1.04
MS4A1P11836 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
MS4A1P11836 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.53■■□□□ 1.04
MS4A1P11836 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC21.53■■□□□ 1.04
MS4A1P11836 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A1P11836 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A1P11836 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
MS4A1P11836 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
MS4A1P11836 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC21.52■■□□□ 1.04
MS4A1P11836 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A1P11836 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MS4A1P11836 CROCCP1-201ENST00000426910 5675 ntBASIC21.52■■□□□ 1.04
MS4A1P11836 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
MS4A1P11836 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A1P11836 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A1P11836 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A1P11836 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A1P11836 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms