Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 AC092364.2-201ENST00000596710 2692 ntBASIC18.37■□□□□ 0.53
PNMA6AP0CW24 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 FGFR3P6-201ENST00000457012 610 ntBASIC18.37■□□□□ 0.53
PNMA6AP0CW24 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 AL645728.1-201ENST00000366221 2101 ntBASIC18.37■□□□□ 0.53
PNMA6AP0CW24 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 AC126177.1-201ENST00000547829 2218 ntBASIC18.37■□□□□ 0.53
PNMA6AP0CW24 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNMA6AP0CW24 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AC091304.2-201ENST00000564639 760 ntBASIC18.36■□□□□ 0.53
PNMA6AP0CW24 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AC008608.2-201ENST00000606089 416 ntBASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AL121772.3-201ENST00000610840 674 ntBASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AL355877.3-201ENST00000622820 899 ntBASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNMA6AP0CW24 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 AL590787.1-201ENST00000568856 1315 ntBASIC18.35■□□□□ 0.53
PNMA6AP0CW24 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 UNC93B7-201ENST00000509439 705 ntBASIC18.35■□□□□ 0.53
PNMA6AP0CW24 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 AL353135.1-201ENST00000606729 504 ntBASIC18.35■□□□□ 0.53
PNMA6AP0CW24 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNMA6AP0CW24 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms