Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLTAP09496 RPSAP43-201ENST00000402237 625 ntBASIC18.35■□□□□ 0.53
CLTAP09496 HCG4-201ENST00000418983 998 ntBASIC18.35■□□□□ 0.53
CLTAP09496 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 GPX1P2-201ENST00000429271 606 ntBASIC18.35■□□□□ 0.53
CLTAP09496 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.35■□□□□ 0.53
CLTAP09496 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CLTAP09496 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.35■□□□□ 0.53
CLTAP09496 MPDU1-223ENST00000582151 728 ntBASIC18.35■□□□□ 0.53
CLTAP09496 AC010327.4-202ENST00000591484 748 ntBASIC18.35■□□□□ 0.53
CLTAP09496 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.35■□□□□ 0.53
CLTAP09496 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.35■□□□□ 0.53
CLTAP09496 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.34■□□□□ 0.53
CLTAP09496 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.34■□□□□ 0.53
CLTAP09496 AC012569.1-201ENST00000591191 1524 ntBASIC18.34■□□□□ 0.53
CLTAP09496 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.34■□□□□ 0.53
CLTAP09496 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLTAP09496 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.34■□□□□ 0.53
CLTAP09496 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.34■□□□□ 0.53
CLTAP09496 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 AC112482.1-201ENST00000492080 688 ntBASIC18.34■□□□□ 0.53
CLTAP09496 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.34■□□□□ 0.53
CLTAP09496 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.34■□□□□ 0.53
CLTAP09496 C20orf181-201ENST00000623918 480 ntBASIC18.34■□□□□ 0.53
CLTAP09496 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLTAP09496 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CLTAP09496 SLC22A20-204ENST00000530038 1673 ntBASIC18.34■□□□□ 0.53
CLTAP09496 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLTAP09496 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLTAP09496 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLTAP09496 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.33■□□□□ 0.53
CLTAP09496 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.33■□□□□ 0.53
CLTAP09496 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLTAP09496 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.33■□□□□ 0.53
CLTAP09496 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLTAP09496 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.33■□□□□ 0.52
CLTAP09496 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.33■□□□□ 0.52
CLTAP09496 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLTAP09496 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.33■□□□□ 0.52
CLTAP09496 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLTAP09496 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.33■□□□□ 0.52
CLTAP09496 AC068137.2-201ENST00000605408 478 ntBASIC18.33■□□□□ 0.52
CLTAP09496 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLTAP09496 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLTAP09496 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.33■□□□□ 0.52
CLTAP09496 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLTAP09496 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLTAP09496 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLTAP09496 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLTAP09496 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.32■□□□□ 0.52
CLTAP09496 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLTAP09496 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLTAP09496 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLTAP09496 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLTAP09496 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms