Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CAPN1P07384 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.56■□□□□ 0.24
CAPN1P07384 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.56■□□□□ 0.24
CAPN1P07384 AC140113.2-201ENST00000604370 208 ntBASIC16.56■□□□□ 0.24
CAPN1P07384 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.56■□□□□ 0.24
CAPN1P07384 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CAPN1P07384 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.56■□□□□ 0.24
CAPN1P07384 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CAPN1P07384 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN1P07384 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CAPN1P07384 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.55■□□□□ 0.24
CAPN1P07384 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.55■□□□□ 0.24
CAPN1P07384 AC027601.4-201ENST00000611259 610 ntBASIC16.55■□□□□ 0.24
CAPN1P07384 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
CAPN1P07384 AC139530.3-201ENST00000620344 690 ntBASIC16.55■□□□□ 0.24
CAPN1P07384 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.55■□□□□ 0.24
CAPN1P07384 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN1P07384 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN1P07384 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.54■□□□□ 0.24
CAPN1P07384 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.54■□□□□ 0.24
CAPN1P07384 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 KRT18P13-201ENST00000400056 1290 ntBASIC16.54■□□□□ 0.24
CAPN1P07384 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.54■□□□□ 0.24
CAPN1P07384 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CAPN1P07384 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 AL356488.2-201ENST00000602755 427 ntBASIC16.54■□□□□ 0.24
CAPN1P07384 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.54■□□□□ 0.24
CAPN1P07384 FAM197Y3-203ENST00000618346 717 ntBASIC16.54■□□□□ 0.24
CAPN1P07384 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms