Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CTSDP07339 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CTSDP07339 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSDP07339 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSDP07339 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSDP07339 BX664615.1-201ENST00000443558 458 ntBASIC13.97□□□□□ -0.17
CTSDP07339 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.97□□□□□ -0.17
CTSDP07339 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CTSDP07339 AC009533.2-201ENST00000543664 586 ntBASIC13.97□□□□□ -0.17
CTSDP07339 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.97□□□□□ -0.17
CTSDP07339 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 AC011840.4-201ENST00000578471 627 ntBASIC13.97□□□□□ -0.17
CTSDP07339 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 AC139887.4-201ENST00000607877 719 ntBASIC13.97□□□□□ -0.17
CTSDP07339 AL592071.1-201ENST00000611956 408 ntBASIC13.97□□□□□ -0.17
CTSDP07339 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.97□□□□□ -0.17
CTSDP07339 AC124864.1-201ENST00000623408 392 ntBASIC13.97□□□□□ -0.17
CTSDP07339 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CTSDP07339 AC006449.6-201ENST00000612330 2296 ntBASIC13.97□□□□□ -0.17
CTSDP07339 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSDP07339 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSDP07339 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSDP07339 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CTSDP07339 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSDP07339 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSDP07339 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CTSDP07339 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSDP07339 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSDP07339 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CTSDP07339 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.96□□□□□ -0.17
CTSDP07339 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.96□□□□□ -0.17
CTSDP07339 AC112907.2-201ENST00000448639 330 ntBASIC13.96□□□□□ -0.17
CTSDP07339 HOMER2P1-201ENST00000455653 964 ntBASIC13.96□□□□□ -0.17
CTSDP07339 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.96□□□□□ -0.17
CTSDP07339 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSDP07339 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.96□□□□□ -0.17
CTSDP07339 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSDP07339 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CTSDP07339 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CTSDP07339 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CTSDP07339 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CTSDP07339 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CTSDP07339 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.95□□□□□ -0.18
CTSDP07339 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.95□□□□□ -0.18
CTSDP07339 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CTSDP07339 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms