Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 AC023274.1-201ENST00000418278 595 ntBASIC18.01■□□□□ 0.47
HLA-DRAP01903 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.01■□□□□ 0.47
HLA-DRAP01903 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DRAP01903 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HLA-DRAP01903 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DRAP01903 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DRAP01903 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18■□□□□ 0.47
HLA-DRAP01903 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HLA-DRAP01903 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DRAP01903 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DRAP01903 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DRAP01903 PGAM5P1-201ENST00000518923 814 ntBASIC18■□□□□ 0.47
HLA-DRAP01903 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
HLA-DRAP01903 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DRAP01903 PDPK2P-202ENST00000562415 1191 ntBASIC18■□□□□ 0.47
HLA-DRAP01903 AL031055.1-201ENST00000606362 631 ntBASIC18■□□□□ 0.47
HLA-DRAP01903 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18■□□□□ 0.47
HLA-DRAP01903 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DRAP01903 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DRAP01903 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRAP01903 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
HLA-DRAP01903 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18■□□□□ 0.47
HLA-DRAP01903 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18■□□□□ 0.47
HLA-DRAP01903 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 AL031731.1-201ENST00000642131 2094 ntBASIC17.99■□□□□ 0.47
HLA-DRAP01903 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRAP01903 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRAP01903 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 AC092919.2-201ENST00000623631 1645 ntBASIC17.98■□□□□ 0.47
HLA-DRAP01903 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.98■□□□□ 0.47
HLA-DRAP01903 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRAP01903 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms