Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 RNU1-129P-201ENST00000384064 167 ntBASIC15.45■□□□□ 0.06
NKX2-2O95096 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.45■□□□□ 0.06
NKX2-2O95096 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.45■□□□□ 0.06
NKX2-2O95096 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.45■□□□□ 0.06
NKX2-2O95096 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NKX2-2O95096 U1.21-201ENST00000580816 167 ntBASIC15.45■□□□□ 0.06
NKX2-2O95096 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 AC007064.4-201ENST00000637740 555 ntBASIC15.45■□□□□ 0.06
NKX2-2O95096 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NKX2-2O95096 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 ZNF259P1-201ENST00000407656 1365 ntBASIC15.45■□□□□ 0.06
NKX2-2O95096 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NKX2-2O95096 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
NKX2-2O95096 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NKX2-2O95096 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NKX2-2O95096 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.44■□□□□ 0.06
NKX2-2O95096 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.44■□□□□ 0.06
NKX2-2O95096 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 SLC25A1P1-201ENST00000528351 927 ntBASIC15.44■□□□□ 0.06
NKX2-2O95096 AC106730.1-201ENST00000566722 1090 ntBASIC15.44■□□□□ 0.06
NKX2-2O95096 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 AC023141.13-201ENST00000604991 943 ntBASIC15.44■□□□□ 0.06
NKX2-2O95096 AL031055.1-201ENST00000606362 631 ntBASIC15.44■□□□□ 0.06
NKX2-2O95096 AC120114.3-201ENST00000611923 658 ntBASIC15.44■□□□□ 0.06
NKX2-2O95096 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.44■□□□□ 0.06
NKX2-2O95096 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX2-2O95096 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
NKX2-2O95096 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.43■□□□□ 0.06
NKX2-2O95096 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NKX2-2O95096 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NKX2-2O95096 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 PMS2P4-201ENST00000412466 1052 ntBASIC15.43■□□□□ 0.06
NKX2-2O95096 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.43■□□□□ 0.06
NKX2-2O95096 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.43■□□□□ 0.06
NKX2-2O95096 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.43■□□□□ 0.06
NKX2-2O95096 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.43■□□□□ 0.06
NKX2-2O95096 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.43■□□□□ 0.06
NKX2-2O95096 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.43■□□□□ 0.06
NKX2-2O95096 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NKX2-2O95096 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.43■□□□□ 0.06
NKX2-2O95096 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.43■□□□□ 0.06
NKX2-2O95096 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.43■□□□□ 0.06
NKX2-2O95096 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms