Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.14■□□□□ 0.18
CPNE3O75131 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CPNE3O75131 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
CPNE3O75131 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE3O75131 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE3O75131 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CPNE3O75131 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE3O75131 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.14■□□□□ 0.17
CPNE3O75131 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE3O75131 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CPNE3O75131 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CPNE3O75131 AC092902.6-201ENST00000641783 218 ntBASIC16.14■□□□□ 0.17
CPNE3O75131 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE3O75131 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CPNE3O75131 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CPNE3O75131 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE3O75131 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE3O75131 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE3O75131 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE3O75131 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE3O75131 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.13■□□□□ 0.17
CPNE3O75131 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.13■□□□□ 0.17
CPNE3O75131 MST1L-201ENST00000442552 2185 ntBASIC16.13■□□□□ 0.17
CPNE3O75131 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CPNE3O75131 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 AC107918.2-201ENST00000530817 355 ntBASIC16.13■□□□□ 0.17
CPNE3O75131 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CPNE3O75131 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE3O75131 AC027796.2-201ENST00000575326 344 ntBASIC16.13■□□□□ 0.17
CPNE3O75131 AP002472.1-201ENST00000577490 586 ntBASIC16.13■□□□□ 0.17
CPNE3O75131 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE3O75131 REXO1L3P-201ENST00000622202 1288 ntBASIC16.13■□□□□ 0.17
CPNE3O75131 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CPNE3O75131 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE3O75131 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CPNE3O75131 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 AC108860.2-201ENST00000562760 2183 ntBASIC16.13■□□□□ 0.17
CPNE3O75131 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
CPNE3O75131 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE3O75131 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE3O75131 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CPNE3O75131 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CPNE3O75131 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 AC002056.1-201ENST00000395613 760 ntBASIC16.12■□□□□ 0.17
CPNE3O75131 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE3O75131 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.12■□□□□ 0.17
CPNE3O75131 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE3O75131 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE3O75131 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms