Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDH7O60245 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH7O60245 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH7O60245 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH7O60245 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH7O60245 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 AC006449.5-201ENST00000610658 2098 ntBASIC16.03■□□□□ 0.16
PCDH7O60245 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH7O60245 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 AF186996.4-201ENST00000467186 377 ntBASIC16.03■□□□□ 0.16
PCDH7O60245 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDH7O60245 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDH7O60245 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH7O60245 AC091167.2-201ENST00000579581 588 ntBASIC16.03■□□□□ 0.16
PCDH7O60245 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH7O60245 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH7O60245 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH7O60245 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDH7O60245 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDH7O60245 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDH7O60245 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.02■□□□□ 0.16
PCDH7O60245 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
PCDH7O60245 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PCDH7O60245 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
PCDH7O60245 KRT18P67-201ENST00000432816 1264 ntBASIC16.02■□□□□ 0.16
PCDH7O60245 AC018712.1-201ENST00000455767 687 ntBASIC16.02■□□□□ 0.16
PCDH7O60245 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDH7O60245 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
PCDH7O60245 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDH7O60245 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH7O60245 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH7O60245 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDH7O60245 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH7O60245 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PCDH7O60245 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH7O60245 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH7O60245 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDH7O60245 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH7O60245 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH7O60245 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH7O60245 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDH7O60245 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.02■□□□□ 0.15
PCDH7O60245 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.02■□□□□ 0.15
PCDH7O60245 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH7O60245 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDH7O60245 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 SNX33P1-201ENST00000592116 1762 ntBASIC16.01■□□□□ 0.15
PCDH7O60245 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH7O60245 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH7O60245 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH7O60245 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH7O60245 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH7O60245 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PCDH7O60245 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH7O60245 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH7O60245 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDH7O60245 HNRNPDP1-201ENST00000439535 754 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms