Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PEX1O43933 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.43■□□□□ 0.22
PEX1O43933 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 SLC25A1P3-201ENST00000395415 828 ntBASIC16.43■□□□□ 0.22
PEX1O43933 FDX1P1-201ENST00000449115 551 ntBASIC16.43■□□□□ 0.22
PEX1O43933 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.43■□□□□ 0.22
PEX1O43933 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 MIR5100-201ENST00000579544 119 ntBASIC16.43■□□□□ 0.22
PEX1O43933 AC005336.2-201ENST00000593183 939 ntBASIC16.43■□□□□ 0.22
PEX1O43933 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.43■□□□□ 0.22
PEX1O43933 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.43■□□□□ 0.22
PEX1O43933 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.43■□□□□ 0.22
PEX1O43933 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PEX1O43933 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PEX1O43933 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.43■□□□□ 0.22
PEX1O43933 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 DBET-201ENST00000630918 3363 ntBASIC16.43■□□□□ 0.22
PEX1O43933 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.42■□□□□ 0.22
PEX1O43933 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PEX1O43933 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.42■□□□□ 0.22
PEX1O43933 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.42■□□□□ 0.22
PEX1O43933 AC005104.2-201ENST00000427818 678 ntBASIC16.42■□□□□ 0.22
PEX1O43933 AC079781.3-201ENST00000449110 356 ntBASIC16.42■□□□□ 0.22
PEX1O43933 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.42■□□□□ 0.22
PEX1O43933 AL160237.2-201ENST00000556165 472 ntBASIC16.42■□□□□ 0.22
PEX1O43933 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.42■□□□□ 0.22
PEX1O43933 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.42■□□□□ 0.22
PEX1O43933 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PEX1O43933 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.42■□□□□ 0.22
PEX1O43933 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PEX1O43933 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.42■□□□□ 0.22
PEX1O43933 AC114341.1-201ENST00000618070 349 ntBASIC16.42■□□□□ 0.22
PEX1O43933 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PEX1O43933 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PEX1O43933 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.41■□□□□ 0.22
PEX1O43933 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PEX1O43933 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.41■□□□□ 0.22
PEX1O43933 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.41■□□□□ 0.22
PEX1O43933 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.41■□□□□ 0.22
PEX1O43933 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.41■□□□□ 0.22
PEX1O43933 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PEX1O43933 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PEX1O43933 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.41■□□□□ 0.22
PEX1O43933 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.41■□□□□ 0.22
PEX1O43933 AC104692.2-201ENST00000603054 253 ntBASIC16.41■□□□□ 0.22
PEX1O43933 AL121912.1-201ENST00000603683 238 ntBASIC16.41■□□□□ 0.22
PEX1O43933 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
PEX1O43933 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PEX1O43933 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.41■□□□□ 0.22
PEX1O43933 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PEX1O43933 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms