Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FOXE1O00358 GPAA1P2-202ENST00000606848 1787 ntBASIC15.98■□□□□ 0.15
FOXE1O00358 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXE1O00358 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 CRYGEP-201ENST00000412192 528 ntBASIC15.97■□□□□ 0.15
FOXE1O00358 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 AC009078.2-202ENST00000463353 338 ntBASIC15.97■□□□□ 0.15
FOXE1O00358 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.97■□□□□ 0.15
FOXE1O00358 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXE1O00358 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXE1O00358 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.97■□□□□ 0.15
FOXE1O00358 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
FOXE1O00358 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
FOXE1O00358 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
FOXE1O00358 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXE1O00358 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
FOXE1O00358 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
FOXE1O00358 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXE1O00358 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXE1O00358 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.96■□□□□ 0.15
FOXE1O00358 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXE1O00358 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXE1O00358 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
FOXE1O00358 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.96■□□□□ 0.15
FOXE1O00358 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 AC079776.4-201ENST00000511039 504 ntBASIC15.96■□□□□ 0.15
FOXE1O00358 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.96■□□□□ 0.15
FOXE1O00358 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
FOXE1O00358 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
FOXE1O00358 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXE1O00358 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXE1O00358 LINC01144-201ENST00000626198 1710 ntBASIC15.96■□□□□ 0.15
FOXE1O00358 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXE1O00358 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.96■□□□□ 0.14
FOXE1O00358 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXE1O00358 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXE1O00358 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXE1O00358 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
FOXE1O00358 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
FOXE1O00358 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
FOXE1O00358 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
FOXE1O00358 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXE1O00358 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXE1O00358 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
FOXE1O00358 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXE1O00358 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXE1O00358 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
FOXE1O00358 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXE1O00358 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXE1O00358 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXE1O00358 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXE1O00358 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXE1O00358 HCG4B-203ENST00000450128 991 ntBASIC15.95■□□□□ 0.14
FOXE1O00358 AL031432.2-201ENST00000566714 459 ntBASIC15.95■□□□□ 0.14
FOXE1O00358 AL928711.1-201ENST00000570165 459 ntBASIC15.95■□□□□ 0.14
FOXE1O00358 MIR3909-201ENST00000579518 119 ntBASIC15.95■□□□□ 0.14
FOXE1O00358 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXE1O00358 AC020765.3-201ENST00000613051 740 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms