Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MBP-237ENST00000579129 1052 ntTSL 5 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 AC068587.9-201ENST00000641814 219 ntBASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 PHGDH-209ENST00000641074 1780 ntBASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 ALK-205ENST00000618119 4646 ntTSL 5 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 AC005562.1-201ENST00000583030 3219 ntBASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 GOLGA6L3-201ENST00000507199 1679 ntBASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHKB-CPT1BH3BT56 AC007292.2-201ENST00000593524 1812 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CICP8-201ENST00000455800 2813 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC7A5P1-201ENST00000568957 537 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AL591742.1-201ENST00000604433 565 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AC104187.1-201ENST00000607510 612 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AL357033.4-201ENST00000617703 1807 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AC124283.5-201ENST00000624661 1809 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 PCDHA9-201ENST00000378122 6900 ntBASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 HAL-202ENST00000538703 2637 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms