Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AC139713.2-201ENST00000641328 2723 ntBASIC16.75■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SPDYE7P-202ENST00000420373 878 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AC105233.2-201ENST00000523697 349 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AF228730.5-201ENST00000530288 346 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SLC25A39P2-201ENST00000537614 270 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AL512356.2-201ENST00000546955 174 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AP000842.3-202ENST00000569238 1080 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 Z92544.3-201ENST00000624747 417 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 PCDHB17P-201ENST00000539533 2393 ntBASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 KRT8P39-201ENST00000396270 1433 ntBASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AC093512.1-201ENST00000617969 520 ntBASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 AL391256.1-201ENST00000443260 1855 ntBASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
C1QTNF3-AMACRE9PGA6 FZD10-202ENST00000539839 3282 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms