Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 NUS1P3-201ENST00000423502 862 ntBASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 AP001889.1-201ENST00000525414 633 ntBASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM88BA6NKF7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 DUX4L45-201ENST00000566406 1057 ntBASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM88BA6NKF7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 AL355864.2-201ENST00000447420 863 ntBASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 AC068587.3-201ENST00000526613 355 ntBASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 AC105129.2-201ENST00000559536 390 ntBASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 MIR4706-201ENST00000582134 82 ntBASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 AC244452.3-201ENST00000636814 210 ntBASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM88BA6NKF7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms