Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC01546A6NGU7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
LINC01546A6NGU7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC01546A6NGU7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
LINC01546A6NGU7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC01546A6NGU7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 AP003071.4-201ENST00000562276 1284 ntBASIC11.83□□□□□ -0.52
LINC01546A6NGU7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 AL138831.2-201ENST00000606564 490 ntBASIC11.83□□□□□ -0.52
LINC01546A6NGU7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 AD001527.2-201ENST00000622994 785 ntBASIC11.83□□□□□ -0.52
LINC01546A6NGU7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 LINC00528-201ENST00000600723 2160 ntBASIC11.83□□□□□ -0.52
LINC01546A6NGU7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 CICP23-201ENST00000605013 2741 ntBASIC11.83□□□□□ -0.52
LINC01546A6NGU7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01546A6NGU7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 AL390755.1-201ENST00000623716 2027 ntBASIC11.82□□□□□ -0.52
LINC01546A6NGU7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 GPAA1P2-202ENST00000606848 1787 ntBASIC11.82□□□□□ -0.52
LINC01546A6NGU7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 HMGA1P5-201ENST00000412453 271 ntBASIC11.82□□□□□ -0.52
LINC01546A6NGU7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms