Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 TSPY5P-201ENST00000426936 936 ntBASIC14.38□□□□□ -0.11
TMEM235A6NFC5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 SPDYE13P-201ENST00000445314 798 ntBASIC14.38□□□□□ -0.11
TMEM235A6NFC5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 TMEM191A-211ENST00000637163 1067 ntBASIC14.38□□□□□ -0.11
TMEM235A6NFC5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 AL596087.1-201ENST00000400979 1969 ntBASIC14.38□□□□□ -0.11
TMEM235A6NFC5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AL021920.2-201ENST00000624828 1351 ntBASIC14.37□□□□□ -0.11
TMEM235A6NFC5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AC144831.1-201ENST00000573312 2656 ntBASIC14.37□□□□□ -0.11
TMEM235A6NFC5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AL137013.1-201ENST00000432946 1228 ntBASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AC011840.4-201ENST00000578471 627 ntBASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AC073592.5-201ENST00000624854 528 ntBASIC14.37□□□□□ -0.11
TMEM235A6NFC5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM235A6NFC5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 AC092384.3-202ENST00000564646 2873 ntBASIC14.36□□□□□ -0.11
TMEM235A6NFC5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 AC010491.1-201ENST00000563101 2797 ntBASIC14.36□□□□□ -0.11
TMEM235A6NFC5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms