Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.89■□□□□ 0.94
HDAC5Q9UQL6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC5Q9UQL6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AL671277.1-201ENST00000429656 993 ntBASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 AC020765.3-201ENST00000613051 740 ntBASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC5Q9UQL6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 MIR1233-2-201ENST00000408138 82 ntBASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 MIR1233-1-201ENST00000408722 82 ntBASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 RN7SL589P-201ENST00000481268 310 ntBASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 RARRES2P8-201ENST00000566335 367 ntBASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 AL078644.1-201ENST00000609881 752 ntBASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 AC079781.4-201ENST00000641908 219 ntBASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC5Q9UQL6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 CEND1P1-201ENST00000451006 455 ntBASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 KRT18P34-201ENST00000488218 1270 ntBASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC5Q9UQL6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC5Q9UQL6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HDAC5Q9UQL6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC5Q9UQL6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms