Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AC002056.1-201ENST00000395613 760 ntBASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AC009093.7-201ENST00000623853 1223 ntBASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.62■■□□□ 1.05
PDZRN3Q9UPQ7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 FAM86C2P-203ENST00000528684 1004 ntBASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 Z92544.3-201ENST00000624747 417 ntBASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDZRN3Q9UPQ7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 ADH5P3-201ENST00000433842 1137 ntBASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 PCDHB19P-201ENST00000570871 2371 ntBASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDZRN3Q9UPQ7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDZRN3Q9UPQ7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDZRN3Q9UPQ7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms