Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 KRT19P2-202ENST00000557173 1012 ntBASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 AC018845.2-201ENST00000568326 409 ntBASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 AC140113.2-201ENST00000604370 208 ntBASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 AC021097.1-201ENST00000607902 574 ntBASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 BCAR1-209ENST00000546196 1340 ntBASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC3Q9UN70 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 AC025580.3-201ENST00000617932 1424 ntBASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 AC109635.5-201ENST00000533593 962 ntBASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGC3Q9UN70 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGC3Q9UN70 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGC3Q9UN70 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
PCDHGC3Q9UN70 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.42
PCDHGC3Q9UN70 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGC3Q9UN70 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 PCDHB19P-201ENST00000570871 2371 ntBASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms