Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 AC116353.5-201ENST00000638148 1699 ntBASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00474Q9P2X8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 LINC00982-205ENST00000420957 435 ntBASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 KRT18P67-201ENST00000432816 1264 ntBASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 BX005266.1-201ENST00000473402 457 ntBASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 OR7E14P-202ENST00000530490 1290 ntBASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 GGTLC5P-201ENST00000617623 998 ntBASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 AC011676.5-201ENST00000624864 2660 ntBASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00474Q9P2X8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00474Q9P2X8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms