Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 FER1L4-210ENST00000615531 5998 ntBASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 AP002469.2-201ENST00000531724 424 ntBASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 AC025062.2-201ENST00000605477 670 ntBASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 AC117500.6-201ENST00000624871 588 ntBASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEUROD4Q9HD90 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 AKR1C7P-201ENST00000305623 895 ntBASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 AC087163.2-201ENST00000457299 853 ntBASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 AC091167.2-201ENST00000579581 588 ntBASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 AL121912.1-201ENST00000603683 238 ntBASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NEUROD4Q9HD90 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 PI4KAP1-204ENST00000612579 1703 ntBASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 ELK2BP-201ENST00000415014 1224 ntBASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NEUROD4Q9HD90 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms