Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 AP000842.3-202ENST00000569238 1080 ntBASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 SPDYE14P-201ENST00000442619 822 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC011467.4-201ENST00000594891 528 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AL390955.2-201ENST00000603032 514 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC008677.1-201ENST00000519230 1561 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AD000864.1-201ENST00000624076 2295 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 RN7SL589P-201ENST00000481268 310 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 PRYP6-201ENST00000514804 343 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 LINC01225-203ENST00000563550 1244 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AL138918.1-201ENST00000568306 659 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC051619.7-201ENST00000568314 623 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC027307.2-201ENST00000591252 911 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC009053.2-201ENST00000563701 2365 ntBASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.85□□□□□ -0.03
KIAA1549Q9HCM3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AC005237.2-201ENST00000434368 219 ntBASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AC069262.1-201ENST00000539058 672 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms