Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 AC092647.4-201ENST00000457211 535 ntBASIC18.78■□□□□ 0.6
CBX8Q9HC52 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 AC011498.5-201ENST00000592027 486 ntBASIC18.78■□□□□ 0.6
CBX8Q9HC52 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.77■□□□□ 0.6
CBX8Q9HC52 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX8Q9HC52 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CBX8Q9HC52 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.77■□□□□ 0.59
CBX8Q9HC52 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX8Q9HC52 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX8Q9HC52 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 LINC00982-205ENST00000420957 435 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 AL020989.1-201ENST00000422979 469 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 AC097493.4-201ENST00000641197 219 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 AC243591.1-201ENST00000452967 1364 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 AC002310.6-201ENST00000624451 1377 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 AC073347.1-201ENST00000421633 2643 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 INTS4P1-201ENST00000438455 1935 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 AP005117.1-202ENST00000581724 1908 ntBASIC18.76■□□□□ 0.59
CBX8Q9HC52 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX8Q9HC52 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX8Q9HC52 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms