Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH20Q9HBT6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CDH20Q9HBT6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH20Q9HBT6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 AC092068.3-201ENST00000587894 2016 ntBASIC14.71□□□□□ -0.05
CDH20Q9HBT6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 SLC25A6P2-201ENST00000497974 877 ntBASIC14.71□□□□□ -0.05
CDH20Q9HBT6 AP002490.2-201ENST00000524791 560 ntBASIC14.71□□□□□ -0.05
CDH20Q9HBT6 SLC25A1P1-201ENST00000528351 927 ntBASIC14.71□□□□□ -0.05
CDH20Q9HBT6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 KRT8P49-201ENST00000604166 1432 ntBASIC14.71□□□□□ -0.05
CDH20Q9HBT6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH20Q9HBT6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH20Q9HBT6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CDH20Q9HBT6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CDH20Q9HBT6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.7□□□□□ -0.06
CDH20Q9HBT6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.7□□□□□ -0.06
CDH20Q9HBT6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 AC034105.1-201ENST00000563488 319 ntBASIC14.7□□□□□ -0.06
CDH20Q9HBT6 AC106730.1-201ENST00000566722 1090 ntBASIC14.7□□□□□ -0.06
CDH20Q9HBT6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 AC018695.7-201ENST00000624587 2492 ntBASIC14.7□□□□□ -0.06
CDH20Q9HBT6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH20Q9HBT6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms