Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 MRPL20P1-201ENST00000400819 433 ntBASIC15.58■□□□□ 0.08
UBQLN3Q9H347 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 CRYGEP-201ENST00000412192 528 ntBASIC15.58■□□□□ 0.08
UBQLN3Q9H347 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.57■□□□□ 0.08
UBQLN3Q9H347 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBQLN3Q9H347 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 IGLL3P-201ENST00000412472 434 ntBASIC15.56■□□□□ 0.08
UBQLN3Q9H347 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.56■□□□□ 0.08
UBQLN3Q9H347 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 KRT18P2-201ENST00000447938 1258 ntBASIC15.56■□□□□ 0.08
UBQLN3Q9H347 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 AC040169.1-201ENST00000565382 521 ntBASIC15.56■□□□□ 0.08
UBQLN3Q9H347 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 FRMD8P1-201ENST00000440433 1524 ntBASIC15.56■□□□□ 0.08
UBQLN3Q9H347 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBQLN3Q9H347 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms