Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 AC087163.2-201ENST00000457299 853 ntBASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 AC006538.1-201ENST00000567905 1585 ntBASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 AC002310.6-201ENST00000624451 1377 ntBASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 SNX33P1-201ENST00000592116 1762 ntBASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 AL671710.1-201ENST00000610245 2349 ntBASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 PCDHA1-201ENST00000378133 2726 ntBASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 CICP6-201ENST00000457191 2729 ntBASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 AL391005.1-201ENST00000623953 2435 ntBASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 PI4KAP1-204ENST00000612579 1703 ntBASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 LINC01711-201ENST00000598340 967 ntBASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF3BQ9BZI7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 AC117500.6-201ENST00000624871 588 ntBASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 TOP3BP1-201ENST00000420768 1380 ntBASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF3BQ9BZI7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms