Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22CQ9BRL7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 IGHV3-52-201ENST00000519770 353 ntBASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22CQ9BRL7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 TSPY12P-201ENST00000421279 868 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 AC096633.1-201ENST00000422446 749 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 SLC25A1P2-201ENST00000430693 912 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 HLA-J-202ENST00000469281 1241 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 AC142086.2-201ENST00000569753 217 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 AC109462.3-201ENST00000573934 613 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 AL157888.1-201ENST00000631930 593 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 AC092865.7-201ENST00000641832 219 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 AC023157.3-201ENST00000619086 2088 ntBASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC22CQ9BRL7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms