Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.27■□□□□ 0.36
CDCA3Q99618 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.27■□□□□ 0.36
CDCA3Q99618 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.27■□□□□ 0.36
CDCA3Q99618 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDCA3Q99618 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
CDCA3Q99618 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.27■□□□□ 0.36
CDCA3Q99618 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.27■□□□□ 0.36
CDCA3Q99618 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 MIR6069-201ENST00000620069 79 ntBASIC17.27■□□□□ 0.36
CDCA3Q99618 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.27■□□□□ 0.36
CDCA3Q99618 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDCA3Q99618 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.27■□□□□ 0.35
CDCA3Q99618 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDCA3Q99618 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDCA3Q99618 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDCA3Q99618 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDCA3Q99618 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDCA3Q99618 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
CDCA3Q99618 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.26■□□□□ 0.35
CDCA3Q99618 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDCA3Q99618 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.26■□□□□ 0.35
CDCA3Q99618 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.26■□□□□ 0.35
CDCA3Q99618 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDCA3Q99618 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.26■□□□□ 0.35
CDCA3Q99618 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.26■□□□□ 0.35
CDCA3Q99618 AP005482.1-201ENST00000563722 1273 ntBASIC17.26■□□□□ 0.35
CDCA3Q99618 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 RRP7BP-205ENST00000566851 833 ntBASIC17.26■□□□□ 0.35
CDCA3Q99618 AC093726.1-201ENST00000608064 963 ntBASIC17.26■□□□□ 0.35
CDCA3Q99618 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 AL354751.1-201ENST00000412768 1863 ntBASIC17.26■□□□□ 0.35
CDCA3Q99618 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.26■□□□□ 0.35
CDCA3Q99618 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.26■□□□□ 0.35
CDCA3Q99618 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDCA3Q99618 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.25■□□□□ 0.35
CDCA3Q99618 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.25■□□□□ 0.35
CDCA3Q99618 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDCA3Q99618 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
CDCA3Q99618 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.25■□□□□ 0.35
CDCA3Q99618 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.25■□□□□ 0.35
CDCA3Q99618 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDCA3Q99618 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CDCA3Q99618 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.25■□□□□ 0.35
CDCA3Q99618 AC234783.1-201ENST00000441761 496 ntBASIC17.25■□□□□ 0.35
CDCA3Q99618 AC093724.1-201ENST00000448659 1027 ntBASIC17.25■□□□□ 0.35
CDCA3Q99618 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.25■□□□□ 0.35
CDCA3Q99618 AC007389.4-201ENST00000454674 793 ntBASIC17.25■□□□□ 0.35
CDCA3Q99618 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.25■□□□□ 0.35
CDCA3Q99618 AC123567.1-201ENST00000548294 1261 ntBASIC17.25■□□□□ 0.35
CDCA3Q99618 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.25■□□□□ 0.35
CDCA3Q99618 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.25■□□□□ 0.35
CDCA3Q99618 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
CDCA3Q99618 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.25■□□□□ 0.35
CDCA3Q99618 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.25■□□□□ 0.35
CDCA3Q99618 AL512343.1-201ENST00000605837 169 ntBASIC17.25■□□□□ 0.35
CDCA3Q99618 AC004461.2-201ENST00000629517 803 ntBASIC17.25■□□□□ 0.35
CDCA3Q99618 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.25■□□□□ 0.35
CDCA3Q99618 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CDCA3Q99618 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.25■□□□□ 0.35
CDCA3Q99618 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDCA3Q99618 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDCA3Q99618 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms