Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC134043.2-201ENST00000624206 2238 ntBASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 AC139713.2-201ENST00000641328 2723 ntBASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 KRT8P19-201ENST00000551916 1455 ntBASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 CSF2RBP1-201ENST00000447905 391 ntBASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 AL589739.1-201ENST00000607720 493 ntBASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 AC046185.3-201ENST00000623228 1824 ntBASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 BTNL10-201ENST00000595971 695 ntBASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 CTBP2P5-201ENST00000454986 1264 ntBASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 FO681548.1-201ENST00000455617 1132 ntBASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.11□□□□□ -0.15
CSMD1Q96PZ7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 AL390961.4-201ENST00000623958 2535 ntBASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 AC025048.3-201ENST00000590609 569 ntBASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CSMD1Q96PZ7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms