Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 PP12613-201ENST00000424958 2230 ntBASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 AC007274.1-201ENST00000439805 662 ntBASIC19■□□□□ 0.63
SYNGAP1Q96PV0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 AL035252.4-201ENST00000624174 288 ntBASIC19■□□□□ 0.63
SYNGAP1Q96PV0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 AC139713.2-201ENST00000641328 2723 ntBASIC19■□□□□ 0.63
SYNGAP1Q96PV0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19■□□□□ 0.63
SYNGAP1Q96PV0 AC008761.3-201ENST00000624803 892 ntBASIC19■□□□□ 0.63
SYNGAP1Q96PV0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 AC092580.3-201ENST00000430932 139 ntBASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNGAP1Q96PV0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms